assignment , MATLAB in Statistics

Assignment Help:

Determine sequence weights for the sequences ACTA, ACTT, CGTT, and AGAT in problem 1 by using Thompson, Higgins, and Gibson method

a) compute pairwise distances between sequences (5pts)
b) build phylogenetic the tree using UPGMA method (15pts)
c) derive sequence weights (15pts)

We assumed additive property when constructed UPGMA tree in problem 1.
What is limitation of this assumption?

Related Discussions:- assignment

Fopen function - file function, fopen function - file function: The fo...

fopen function - file function: The fopen opens the file for reading. The fscanf then reads each line one double and one character, and put each pair in individual columns in

Nested functions, Nested Functions: We have seen that the loops can be...

Nested Functions: We have seen that the loops can be nested, that means that one inside of the other, functions can be nested. The terminology for nested functions is that an

Example of mode, Example of Mode When no value appears more often than ...

Example of Mode When no value appears more often than any other, the smallest value in the vector will be the mode of the vector. >> shortx = [2 5 1 4]; >> mode(shortx

Location of a rectangle - graphics objects, Location of a rectangle - graph...

Location of a rectangle - graphics objects: The location of a rectangle is [x y w h], where x and y are the coordinates of the lower left point, here w is the width, and h is

Persistent variables, Persistent Variables: Generally, whenever a func...

Persistent Variables: Generally, whenever a function stops executing, then the local variables from that function are cleared. That means that each and every time a function i

Example of functions which return values, Example of Functions which return...

Example of Functions which return values: Calling this function prints the circumference, since there is no way to store the value, hence, it can be used in following computat

Function sortrows - sorting strings, function sortrows - sorting strings: ...

function sortrows - sorting strings: The function sortrows sorts each and every row as a block, or group, and it also will work on numbers. Here in this illustration the rows

Advanced file input and output, Advanced File Input and output: Where ...

Advanced File Input and output: Where 'format' involves the conversion characters much like those used in the fprintf function. For illustration, to read the file 'subjexp.dat

Roots function - polynomials, Roots function - Polynomials: The roots ...

Roots function - Polynomials: The roots function in MATLAB is used to find the roots of an equation represented by a polynomial. For illustration, for the mathematical functio

Example of vectorizing, Example of Vectorizing: Likewise, for an opera...

Example of Vectorizing: Likewise, for an operation on a matrix, a nested loop would be needed; for illustration, supposing a matrix variable mat: [r c] = size(mat); for

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd