The enzyme papain is a thiol protease

Assignment Help Biology
Reference no: EM13526738

The enzyme papain is a thiol protease, using a mechanism similar to the mechanism used by chymotrypsin, except that there is an active site Cys in papain carrying out the catalytic role played by the active site Ser of chymotrypsin. There is a His residue in papain that plays the same role as the active site His residue in chymotrypsin.

1) Name the region of the chymotrypsin active site responsible for tight transition state binding in chymotrypsin’s chemical mechanism.

2) Like chymotrypsin, papain should also have a region responsible for binding/stabilizing the transition state in its peptide hydrolysis mechanism. Use your knowledge of the mechanism of chymotrypsin to name the structural element of the transition state that would be tightly bound by papain. (You don’t need to draw a structure.)

Reference no: EM13526738

Questions Cloud

What is most likely genotypic arrangement of genes in mother : Red-green colorblindness is the most common form of colorblindness and is caused by two closely linked genes located near the tip of the human X chromosome. Red blindness, or protanopia, and green blindness, or deutanopia, are recessive conditions..
Determine the genotypes of the parents : Black coat color in Cocker Spaniels is governed by a dominant allele and red coat by a recessive allele; solid pattern is governed by the dominant allele of another gene and spotted pattern is recessive.
Use recombinant dna methods to prepare a mutant : A drug company decided to use recombinant DNA methods to prepare a mutant a1-antiproteinase (also sometimes referred to by its old name, a1-antitrypsin) that would be moreresistant to oxidation than the naturally occurring inhibitor, to administer..
For the definitions-synarthrotic-amphiarthrotic : for the definitions: synarthrotic, amphiarthrotic, and diarthrotic joints detailing the type of movement and location of each....
The enzyme papain is a thiol protease : The enzyme papain is a thiol protease, using a mechanism similar to the mechanism used by chymotrypsin, except that there is an active site Cys in papain carrying out the catalytic role played by the active site Ser of chymotrypsin.
Calculate the fraction of the total enzyme active sites : Calculate the fraction of the total enzyme active sites in solution that would be in the active form at pH 7.2. Calculate what kcat would be if the activity of the enzyme were measured at pH 7.2.
responsible for the pH effect on kcat : Suppose that an enzyme uses a catalytic mechanism in which a functional group on the enzyme has to accept a proton from the intermediate formed in the first chemical step
Homozygous recessive yellow-bodied-echinus-white-eyed female : In fruit flies, the yellow-bodied (y), echinus (ec) and white-eyed (w) mutations are all recessive to their corresponding normal alleles. A homozygous recessive yellow-bodied, echinus, white-eyed female (y ec w / y ec w, the gene order is arbitrar..
A woman is heterozygous. : A woman is heterozygous. Which one could produce an egg in which two X chromosomes carry an allele for the recessive trait color blindness: nondisjunction during meiosis 1 or nondisjunction during meiosis 2? Then, Explain.

Reviews

Write a Review

Biology Questions & Answers

  Estimate ph of the mixture

A reactio mixture containing 20 mM O-acetly serine, fifty mM NaCl, 50 mM HEPES buffer (pH 7.6), and O-acetyl serine is incubated at 37 C until the O-acetyl serine is completely hydrolyzed.

  The structure of biological membranes

The structure of biological membranes is estimated primarily by the lipid bilayer but the specific functions of these membranes are carried out through proteins associated with the membrane.

  Determine what percentage of the genome is in genes

It is estimated that the human genome contains 25,000 genes and the average length of the coding sequence of a gene is 3,000 base pairs. Using these numbers, determine what percentage of the genome is in genes.

  Which pair of genes is linked to each other

The following cross involving three genes was performed: Aa Bb Cc x aa bb cc, and the phenotypes and number of progeny are shown below. Each pair of alleles exhibits simple dominance and recessiveness.

  Use a punnet square to show

Coat color in cats is a codominant trait and is also located on the X chromosome. Cats can be black, yellow or calico. A calico cat has black and yellow splotches. In order to be calico, the cat must have an allele for the black color and an allel..

  Describe the prezygotic or postzygotic

What type(s) of reproductivebarriers are most likely at play in reproductive isolation of the two species- Prezygotic or postzygotic

  Describe the process of viral replication

Describe the process of viral replication; discuss both normal and retroviruses, and comment on the implications of this process for genetic engineering.

  Deduce the inheritance of the phenotypes

The normal eye color of Drosophila is red, but strains in which all flies have brown eyes are available. Similarly, wings are normally long, but there are strains with short wings.

  Q1 thirteen-year-old ryan has begun to challenge many of

q1. thirteen-year-old ryan has begun to challenge many of his parents values and to express his own set of highly

  Q1 dna fingerprinting identifies individual bears and also

q1. dna fingerprinting identifies individual bears and also allows for determining gender of the bear. what information

  Define the synthetic rnas

Supposethey added the enzyme to a solution of 90%CTP and 10%UTP, and then used a cell-free system of protein synthesis to make peptidesaccording to the sequences in their synthetic RNAs

  What do chloroplasts and mitochondria have in common

What do chloroplasts and mitochondria have in common

Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd