Difference between global and local sequence alignment

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Reference no: EM133912545

Assignment:

Task 1 After reviewing this week's readings and lecture notes, answer the following: What is the difference between global and local sequence alignment, and when would you choose one over the other? Why is sequence similarity an important concept in bioinformatics, and how does it relate to evolutionary relationships?

Task 2 Select one similarity search tool discussed this week (e.g., BLAST, FASTA, HMMER) and: Summarize its core functionality and common use cases. Provide an example scenario in genomics or transcriptomics where this tool would be the preferred choice. What was the total size of the raw sequence data you used in your assembly process? What was the total size of the final scaffolds.fasta file you generated? Explain why there may be a discrepancy between the two.

Reference no: EM133912545

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