Calculate the nucleotide diversity

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Reference no: EM1382092

For the population in Qu 1, we sequence the alleles and find that they differ only at the following sites:

Adh locus Site # 32 46 52 171 206 gene length = 210

Allele A T C G A C

B A T A G T

Mdh locus Site # 48 98 165 gene length = 180

Allele A T C G

B T T G

C A C G

D T C A

Est-A locus Site # 18 55 186 213 gene length = 240

Allele A T C G A

B T T G T

C A T A A

Given these data and using the frequency data given in Qu1, for each of the 4 loci:

a) Calculate the number of SNPs and % segregating sites.

b) Calculate the nucleotide diversity.

Reference no: EM1382092

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