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Calculating and Visualizing Sequence Statistics
Follow the instructions in this demo file to download a sequence and calculate and visualize its statistics. Save all the commands in a script file called "yourname_lab8_1.m".
Modify the script to analyze a different sequence, human insulin receptor gene with genbank accession number 'M10051'. Notice the ORF of this gene is different from those in the mitochondria example, so that you need to modify the code that extracts the ORF of interest (the longest ORF). Also create a Microsoft word file called "yourname_lab8_1", and add all figures generated by the script to the word document. Submit both the modified script and the word document.
Sequence Alignment and BLAST Search
Follow the instructions in this example to download and compare two genes using sequence alignment. Save all the Matlab commands in a script file called "yourname_lab8_2.m". Remember adding comments in the scripts.
Your task is to implement the PHYSAT algorithm in Matlab to classify the phytoplankton species in the data you have selected. An algorithm demonstrating one solution is provided b
The Programming Concept: In most of the programming languages, random function returns a real number; therefore the real number would then have to be rounded to produce a rand
Solve the optimality condition for each P equation against M according to the following relation: Condition for Optimality: ∇ M = λ ∇ P with respect to C and T.
Illustration of a conditional loop - While loop: As an illustration of a conditional loop, we will write a function which will find the first factorial which is greater than t
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Variable number of output arguments: The variable number of output arguments can also be identified. For illustration, the one input argument is passed to the below function t
You are asked to create an american option multiplicative binomial model calculator in MatLab. Both put and call options should be valued. Given u, d, S 0 , K, r, and T (the usual
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