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1. Work out an approximate % homology of your sequence with existing known crystal structures (3D structures).
2. Having ascertained that a reasonably high % of your protein sequence has homology with existing 3-D structures we will now try to do homology modelling for the entire length of the protein sequence.
3. Using your sequence information as before use the homology modelling servers Swiss-Model to find a model for your sequence.
4. Servers will produce results files which will be e-mailed to you. The pdb files contain coordinates for models produced.
5. Use Swiss PDB viewer (DeepView) for Swiss-Model output and rasmol for 3D-jigsaw (may also be able to use Swiss PDB viewer) to view output files.
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The present solution is based on the concept of Bioinformatics. The solution comprises of more than 1000 words.The solution is completely new and is free from any type of plagiarism.Instructions were followed for the preparation of this assignment and references also included at the end of the assignment. The solution is submitted in the Microsoft Word file.
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