Find an optimal global alignment

Assignment Help Biology
Reference no: EM13334124

Sequence Alignments:

Consider the sequences S1 = TACGGGTAT and S2 = GGACGTACG. Assume that the match

score is 1, mismatch score is -1, and gap penalty is d = 2.

a. Find an optimal global alignment

b. Final an optimal local alignment

(Note: Show the dynamic programming matrices and backtracking path (See lecture notes).

Reference no: EM13334124

Questions Cloud

Determines the surface area and volume of a hemisphere : Write an application that reads determines the surface area and volume of a hemisphere and then calculates the radius given a surface area and volume.The first step is to read in the radius from the users and then calculate the surface area and vo..
Simulate a simple version of a game called liar dice : The first player claims a Poker hand (see "Hand Ranks" below for legal calls). When making a claim, a player says what all five dice are, not just the name of the hand. For example, a player should say, "I have a full house: three 4s and two 5s," ..
Determine what is the size of the settlement on a jury : You are serving on a jury. A plaintiff is suing the city for injuries sustained after a freak street sweeper accident. In the trial, doctors testified that it will be five years before the plaintiff is able to return to work.
Define physical property can be observed without a chemical : A chemical property of a substance can be observed without changing its composition or interacting with another substance. -A physical property can be observed without a chemical reaction.
Find an optimal global alignment : Find an optimal global alignment
What is the change in the period of the pendulum : A simple pendulum uses a steel wire as the "string." The length of this wire is 1.5 m at room temperature. What is the change in the period of the pendulum
Explain hybrid routing protocols : Describe how a computer’s bus can be expanded to include devices other than those found on the motherboard. When selecting a NIC to install, explain what an administrator should do if a motherboard supports more than one kind of expansion slot. Expla..
Write a business plan-feasibility analysis : We need to write a business plan (feasibility analysis) about our product(solar backpack). My part is Operational analysis! Please tell me how to do it.
Explain during a chemical change or reaction : During a chemical change or reaction, a substance is changed into one or more different substances. The _________ composition and the physical

Reviews

Write a Review

Biology Questions & Answers

  Most common anticonvulsants or tranquilizers

What drugs are commonly used to anesthetize a patient undergoing abdominal surgery and why? Critically discuss the most common anticonvulsants or tranquilizers used to treat epileptic patients (drugs to prevent seizures)?

  Male offspring with the allele combinations

Explain why there are no male offspring with the allele combinations

  Recognize the non-mendelian mode of inheritance

A woman from the family with normal cholesterol marries a man with no LDL receptors, and all their children have cholesterol levels twice the normal of the mother.

  What was the purpose of incubating an unopened plate

What was the purpose of incubating an unopened plate? What would have been an appropriate label for this plate?

  Calculate the titer of the virus stock

A virus stock was diluted to 10^-8 and 0.1 ml assayed in triplicate. The plaque counts were 22, 18, and 20. Calculate the titer of the virus stock.

  Prepare standard curve by mixing monosaccharide dilutions

Assume you perform a colorimetric enzyme assay to determine the activity of invertase in a bioreactor total volume = 1L used to produce inverted sugar.

  Describe the osmotic and pressure potential

From this information, calculate the original water potential, osmotic potential and pressure potential of the epidermal cells, In .1M mannitol the epidermal cells neither gain nor lose weight

  Suppose a person has spinal cord damage at cervical level

Suppose a person has spinal cord damage at the cervical level. Would this stop the knee-jerk reflex? How would it affect the plantar (Babinski) reflex?

  Which of the following mchanisms of disease best explains

A 28-year old woman severly twists her right ankle in a sleeding accident. Four hours later, the ankle is swollen and appers blue-white. Which of the following mchanisms of disease best explains the function of bradykinin geenerated at the site of..

  Different hypothalamic regions and peripheral signals

List the different hypothalamic regions and peripheral signals involved in the control of feeding and satiety.

  Principles of microbiology

This assignment has three parts which contains questions related to Microbiology. It contains basic principles of microscopy, staining techniques in microbiology and microbial growth in the food industry.

  What kinds of matings would produce only palominos

what kinds of matings would produce only palominos

Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd