Calcaulte the fold change and rank them by fold change

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Reference no: EM131427901

This is a microarray long-non coding RNA expression date for LUAD(lung cancer vs nomral) in Korean.

Calcaulte the fold change and rank them by fold change?

Probably the FDR is quite high, so could you please find the outliner as well ( PCA method in edgeR) and plot the MA plot.

Maybe also a heatmap suggest you can use R package (edgeR or DEseq2) Could you please show me all the step with screen capture as well as the script and all the raw file with sloted data ps we are using the hg19.

https://www.dropbox.com/s/ieqsajjvqt2ydxo/OTHERLUAD_KOREArnaexpr.rar?dl=0

Reference no: EM131427901

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len1427901

3/15/2017 3:12:17 AM

This is a microarray long-non coding RNA expression date for LUAD(lung cancer vs nomral) in Korean , could u pls calcaulte the fold change and rank them by fold change probably the FDR is quite high , so could u pls help me find the outliner as well ( PCA method in edgeR) and plot the MA plot for me as well , maybe also a heatmap i suggest u can use R package (edgeR or DEseq2) Could u pls show me all the step with screen capture as well as the script and all the raw file with sloted data ps we are using the hg19

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