Analysis of metavirome from bioremediation culture

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Reference no: EM132592633 , Length: word count:2000

Analysis of Metavirome from Bioremediation Culture in R

• Background
o What is a metavirome?!
o Bioremediation
o Horizontal Gene Transfer
o So, what can R (and this tutorial) do?
• Prepare Workspace
o Install & Load Packages
o Set working directory
• Part I: Browse Metavirome Annotations
o Import data
o Tidy data
o Browse annotations
o Summary
• Part II: Browse IME1s
o Import data
o Tidy data
o Browse annotations
o Tidy data (again)
o Graph IME1s
o Summary
• Part III: Browse IME1-like Metavirome Scaffolds
o Import data
o Tidy data
o Graph IME1-like Scaffolds
o Summary
• Part IV: Compare IME1s and IME1-like Metavirome Scaffolds
o Import BLASTn Comparisons
o Graph IME1 and IME1-like Metavirome Scaffold Comparisons
o Summary
• Conclusion
• Bibliography
o References

Part I: Browse Metavirome Annotations
Part II: Browse IME1s
Part III: Browse IME1-like Metavirome Scaffolds
Part IV: Compare IME1s and IME1-like Metavirome Scaffolds

Attachment:- project.rar

Reference no: EM132592633

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len2592633

8/5/2020 11:48:48 PM

open the link for my selected project the data is available on the NCBI website The data can be found on the NCBI (Accession: PRJNA311178). Data Type is Transcriptome or Gene expression. the link that I provide is my selected project the images are the points I need to cover the data will be RNA sequence the attached file is an example of the project u can see it to get an idea on how the project should be done As I need the project to be done using R studio with a brief explanation

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