Create a subroutine, Database Management System

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.

Posted Date: 3/14/2013 1:49:41 AM | Location : United States







Related Discussions:- Create a subroutine, Assignment Help, Ask Question on Create a subroutine, Get Answer, Expert's Help, Create a subroutine Discussions

Write discussion on Create a subroutine
Your posts are moderated
Related Questions
Why do so various organizations use MySQL? Advantages: Open source Highly efficient Offers a high scalability in terms of size and connectivity. Highly prote

Ancestry database records information about family trees . Following information is recorded about each person: FIRSTNAME first name SURNAME surname MNAME maiden name (if

Consider the following relations:  S (S#, SNAME, STATUS, CITY)  SP (S#, P#, QTY)  P (P#, PNAME, COLOR, WEIGHT, CITY) Give an expression within SQL for each of queries b

Explain DML with some examples? DML - Data Manipulation Language: statements used for managing data within schema objects. Some examples: • SELECT - retrieve data from the a da

What is an entity relationship model?  The  entity  relationship  model  is  a  collection  of  basic  objects  known as entities  and  relationship  between  those objects. An


Define the terms i) Entity set ii) Relationship set Entity set: The set of all entities of the similar type is termed as an entity set. Relationship set: The set of all rela

what is correlation in nested query

What is NULL? Give an example to described testing for NULL in SQL? The NULL SQL keyword is used to represent either a missing value or a value which is not applicable in a re

Question 1 Explain the concept of database recovery management. Explain the different levels of backup used for recovering data Question 2 What are the different types of par